[InterMine Dev] uniprot and go-annotation failing?

Julie Sullivan julie at flymine.org
Thu Aug 27 16:29:24 BST 2009


I see your Gene.primaryIdentifier priority.  What about Gene.symbol?  Maybe you 
need to add a priority for that field.  That's the field that had conflicting 
values, according to that stacktrace you sent.

Sierra Moxon wrote:
>> Gene.symbol seems to be the problem here.  What is your priority 
>> config for that field?  eg:
>>
>> Gene.symbol = \
>>  zfin-identifiers, \
>>  uniprot, \
>>  *
> 
> in genomic_priorities.properties:
> Gene.primaryIdentifier = \
>   uniprot, \
>   *
> in zfinmine_priorities.properties:
> Gene=zfin-identifiers,zfin_genotypes,zfin_expression,go-annotation,uniprot-zebrafish 
> 
> 
> I'm guessing I need to add a zfin-identifiers line to 
> genomic-priorities.properties?
> 
> One file is for columns, the other is for entire loads?
> 
> Sierra
> 
> 



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