[InterMine Dev] bioseg error message
kkarra at stanford.edu
Tue Nov 24 16:01:33 GMT 2009
We did install bioseg in template1 before trying the build. This is
On Nov 24, 2009, at 6:35 AM, Vallejos, Andrew wrote:
> I know I have raised this question before. But I have run into the
> similar problem with InterMine requiring BioSeg. According to the
> documentation BioSeg is considered optional, but in my experience I
> never gotten a successful build without first installing BioSeg.
> -----Original Message-----
> From: dev-bounces at mail.intermine.org
> [mailto:dev-bounces at mail.intermine.org] On Behalf Of Matthew Wakeling
> Sent: Tuesday, November 24, 2009 5:37 AM
> To: Julie Sullivan
> Cc: Kalpana Karra; Intermine
> Subject: Re: [InterMine Dev] bioseg error message
> On Tue, 24 Nov 2009, Julie Sullivan wrote:
>> In the last section, the documentation says to install bioseg on all
>> databases - including template1. If this step was skipped then new
>> won't have bioseg installed.
> Sorry, the documentation wasn't completely clear on this, but you
> not install bioseg to the template0 or postgres databases - these two
> should never be altered.
> However, you should install bioseg to the template1 database, and any
> databases you create will then have bioseg installed. Existing
> will need to have bioseg manually installed.
> The third years are wandering about all worried at the moment because
> have to hand in their final projects. Please be sympathetic to them,
> things like "ha-ha-ha", but in a sympathetic tone of voice
> -- Computer Science Lecturer
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> dev at mail.intermine.org
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