[InterMine Dev] cannot find superclass "org.intermine.model.bio.LocatedSequenceFeature"

julie at flymine.org julie at flymine.org
Sun Oct 23 01:03:05 BST 2011


LocatedSequenceFeature was renamed SequenceFeature in the InterMine 0.96
release.  Try that instead?

> Hi,
>   I am going through on how to create a new data source (
> http://intermine.org/wiki/SourceHowto ) and get this error when
> building my database:
> ....
> Caused by: org.intermine.modelproduction.ModelMergerException: cannot
> find superclass "org.intermine.model.bio.LocatedSequenceFeature" of
> <class name="NewFeature" extends="LocatedSequenceFeature"
> is-interface="true">
> 	<attribute name="confidence" type="java.lang.Double"/>
> 	<attribute name="identifier" type="java.lang.String"/>
> 	<reference name="protein" referenced-type="Protein"
> reverse-reference="features"/>
> </class>
>
>   It seems the build process failed because it couldn't find the
> superclass "LocatedSequenceFeature".  Could someone tell me how to fix
> this?
>
> Thanks,
>
> Q
>
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