[InterMine Dev] Querying GO terms
Lewis, Brian Andrew
brilewis at iupui.edu
Thu Sep 8 15:32:54 BST 2011
Date: Thu, 08 Sep 2011 14:58:34 +0100
From: Julie Sullivan <julie at flymine.org<mailto:julie at flymine.org>>
To: dev at intermine.org<mailto:dev at intermine.org>
Subject: Re: [InterMine Dev] Querying GO terms
Message-ID: <4E68CA0A.20703 at flymine.org<mailto:4E68CA0A.20703 at flymine.org>>
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Which organisms are you loading?
On 08/09/11 14:45, Lewis, Brian Andrew wrote:
> In our instance of InterMine I've loaded several public data sources
> including ensembl, HGNC, BioGrid, UniProt, and GO. When I run the
> project_build script,
I'm not getting any error messages at all and all the data sources look like they have been loaded. However, when I go to the web application and try to query any
GO terms related to specific genes I get no results back. I checked out the database and there is a genegoannotation table but there are no rows, which is probably
the reason why the query is coming back negative. Do I need to create an addition file for these objects to be associated?
> dev mailing list
> dev at intermine.org<mailto:dev at intermine.org>
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