[InterMine Dev] Go-annotation parser

James Blackshaw jab250 at mrc-mbu.cam.ac.uk
Fri Jun 22 12:08:35 BST 2012


This is currently the only problem holding up my re-release. I don't 
think it's connected to the new uniprot format as we are using a version 
from last year at the moment. The go_annotation and all_go_annotation 
tables are filled, but the respective go_annotationprotein tables are empty.

-James

On 15/06/2012 17:06, James Blackshaw wrote:
> Hi,
> for some reason the Go-annotation parser isn't always creating links 
> from protein->goannotation. It worked the last time I ran an 
> integration once I'd ran summarise-objectstore in postprocess, but not 
> this time. I haven't changed the go-annoation source at all. Are there 
> any other factors I'm not considering here?
>
> -James





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