[InterMine Dev] Unable to configure Intermine to work with GBrowse

Julie Sullivan julie at flymine.org
Wed Nov 7 13:37:29 GMT 2012


Can you try to copy the /gbrowse directory from FlyMine? You'll have to replace 
"FlyMine" with your mine - in the build.xml, project.properties and FlyMine.conf.

The script to create your new mine should have created this for you. But didn't. 
Sorry, I'll see that's fixed.

On 07/11/12 07:59, Allan Kamau wrote:
> I am using the documentation at "
> http://intermine.org/wiki/GBrowseConfiguration" describing how to get
> GBrowse to display data from Intermine.
>
> I have successfully installed GBrowse and can run and reconfigure the test
> project "volvox". And I do have a fully functional mine running on
> Intermine.
>
> I am stuck at the "Creating files for GBrowse" section. The instruction "On
> your local machine, in<mine>/gbrowse ..
> I do not have gbrowse directory in my mine. Using my mine's directory as my
> current working directory, a search for the string (ant task)
> "install-gbrowse-conf" exists only in build.xml found in
> "../imbuild/gbrowse.xml" (relative to my mine's directory) and "write-gff"
> ant task is found at "../imbuild/gbrowse.xml".
>
> What should I do to have my mine's directory furnished with files (and
> directories) required to run the Intermine-GBrowse configuration exercise?
>
> Allan.
>
>
>
>
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