[InterMine Dev] Storage of long sequences

JD Wong jdmswong at gmail.com
Mon Mar 11 20:56:25 GMT 2013


Hi Julie,

intermine_sequence seems to map to residues, Alex mentioned sequences are
stored in CLOBs.  For debugging purposes, do you know where I can find
these?

Thanks,
-JD

On Mon, Mar 11, 2013 at 3:18 PM, Julie Sullivan <julie at flymine.org> wrote:

> "sequence" is marked as a reserved word (mistakenly imo), so the table is
> called "intermine_sequence".
>
>
> On 11/03/13 18:41, JD Wong wrote:
>
>> Hello developer list,
>>
>> In my mine's production database, I'm looking for a query to display the
>> sequence for a specific protein.  Does anybody know where in the database
>> sequences are stored?
>>
>> Thank you!
>> -JD
>>
>>
>>
>>
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