[InterMine Dev] export to galaxy..

Joel Richardson Joel.Richardson at jax.org
Mon Mar 17 12:44:33 GMT 2014


Thanks for the link, Alex. I have sent a message to their dev list.

Joel

-- 
Joel E. Richardson, Ph.D.
Sr. Research Scientist
Mouse Genome Informatics
The Jackson Laboratory
600 Main Street
Bar Harbor, Maine 04609
207-288-6435
joel.richardson at jax.org





On 3/17/14 8:01 AM, "Alex Kalderimis" <alex at intermine.org> wrote:

>Actually it is totally an issue to raise with Galaxy - the get-data
>panel no longer has any of the mines!
>
>A.
>
>On 17/03/14 11:59, Alex Kalderimis wrote:
>> Sounds like a ticket to raise with Galaxy.
>> 
>>   https://wiki.galaxyproject.org/Issues
>> 
>> A.
>> 
>> 
>> 
>> On 16/03/14 12:19, Joel Richardson wrote:
>>>
>>> Hi Kalpana,
>>>
>>> Confirmed. I tried sending to the local Jax Galaxy server and it worked
>>> fine. Looks like the main server is missing the mine tools.
>>>
>>> Joel
>>>
>>> -- 
>>> Joel E. Richardson, Ph.D.
>>> Sr. Research Scientist
>>> Mouse Genome Informatics
>>> The Jackson Laboratory
>>> 600 Main Street
>>> Bar Harbor, Maine 04609
>>> 207-288-6435
>>> joel.richardson at jax.org
>>>
>>> From: Kalpana Karra <kkarra at stanford.edu <mailto:kkarra at stanford.edu>>
>>> Date: Friday, March 14, 2014 6:15 PM
>>> To: Intermine Developer List <dev at intermine.org
>>><mailto:dev at intermine.org>>
>>> Subject: [InterMine Dev] export to galaxy..
>>>
>>>     ..is not working (checked mouse and fly as wellŠ) Could it be that
>>>     galaxy does not offer them as tools? I don¹t see it listed on their
>>>     home page either.
>>>     URL has changed as well, so we would have to modify in
>>>     web.properties..perhaps..
>>>     galaxy.baseurl.default = http://main.g2.bx.psu.edu
>>>     -Kalpana
>>>
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>> 
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