[InterMine Dev] saving list -> error

Joel Richardson Joel.Richardson at jax.org
Wed Jul 15 21:44:00 BST 2015

Another issue... when I try to save a list from a collection on a report page, I'm getting a "service failed" error.
Here's an example error:

15/07/15,16:26:18 ERROR org.intermine.webservice.server.WebService     - Service failed by internal error. Request parameters:
listName: Sequence Feature List (Wed Jul 15 2015 16:26:14 GMT-0400 (EDT))
query: <query model="genomic" view="Gene.targets.target.id" ><join path="Gene.targets.target" style="OUTER"/><constraint path="Gene.id" op="=" value="7634344" code="A" /><constraint path="Gene.targets.id" op="IS NOT NULL" /></query>
name: Sequence Feature List (Wed Jul 15 2015 16:26:14 GMT-0400 (EDT))
java.lang.IllegalArgumentException: Query has incorrect number of SELECT elements.

  at org.intermine.objectstore.intermine.ObjectStoreWriterInterMineImpl.addToBagFromQuery(ObjectStoreWriterInterMineImpl.java:1195)
  at org.intermine.api.profile.InterMineBag.addToBagFromQuery(InterMineBag.java:786)
  at org.intermine.webservice.server.query.QueryToListService.generateListFromQuery(QueryToListService.java:154)
  at org.intermine.webservice.server.query.QueryToListService.execute(QueryToListService.java:95)
  at org.intermine.webservice.server.WebService.service(WebService.java:350)
  at org.intermine.webservice.server.query.QueryToListServlet.runService(QueryToListServlet.java:59)
  at org.intermine.webservice.server.query.QueryToListServlet.doPost(QueryToListServlet.java:46)
  at javax.servlet.http.HttpServlet.service(HttpServlet.java:647)
  at javax.servlet.http.HttpServlet.service(HttpServlet.java:728)

The query looks OK to me. I can paste it into the query builder and run it with no problem.

Oh, I should mention, this is in trying to upgrade to InterMine 1.5.3.


Joel E. Richardson, Ph.D.
Sr. Research Scientist
Mouse Genome Informatics
The Jackson Laboratory
600 Main Street
Bar Harbor, Maine 04609
joel.richardson at jax.org

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