[flymine-announce] FlyMine 22.0 released

Rachel Lyne rachel at flymine.org
Mon Jan 4 14:39:23 GMT 2010


We have released version 22.0 of FlyMine (www.flymine.org)

In this release data from FlyBase has been updated to release
FB2009_10 and many other data sources have been updated to the latest
versions. In addition we have added GO annotation for protein domains
from InterPro and a microRNA widget to list analysis pages which shows
enrichment of microRNAs targetting the genes in a list.

For a full list of data sources see 
www.flymine.org/release-22.0/dataCategories.do
For all types of help and feedback email support at flymine.org


Accessing the protein domain GO annotation data:

To query for GO annotation associated with the domains of a particular 
protein or list of proteins you can use the following template query:

http://www.flymine.org/release-22.0/template.do?name=protein_domainsGOterms&scope=all

To query for the GO annotation associated with a particular domain or 
list of domains use the template:

http://www.flymine.org/release-22.0/template.do?name=proteinDomain_GOannotation&scope=all

Please let us know if you need any further help accessing this or any of 
the data in FlyMine.


The FlyMine Team


- About FlyMine -
FlyMine is an integrated database of genomic, expression and protein
data from Drosophila, Anopheles and C. elegans.  As an integrated
resource it is possible to run data mining queries that span domains of
biological knowledge. FlyMine is a freely available resource.
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